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http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3525.html
cancer_study_id: bcc_unige_2016
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Hello,
I would like to use Survirus to detect integration sites in human cancer cells from RNA-seq data.
I'am currently testing the tool on the sample L526401A for which viral integration site hav…
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Dear Mr. J. Teuwen,
I have recently been reviewing your article titled "DeepSMILE: Contrastive self-supervised pre-training benefits MSI and HRD classification directly from H&E whole-slide images in…
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## Bug Report
### Affected tool(s) or class(es)
Funcotator
### Affected version(s)
GATK 4.1.0.0
### Description
Funcotator does not perform any annotation on a minimal VCF with canonical …
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This file...
```markdown
---
title: "Cancer Mortality Exploration"
author: "w203 Teaching Team"
output: pdf_document
---
## Background
In this lab, imagine that your team is hired by a h…
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Hi,
I am trying this out on the example visium10x dataset for prostate cancer (https://www.10xgenomics.com/resources/datasets/human-prostate-cancer-adenocarcinoma-with-invasive-carcinoma-ffpe-1-stand…
adiv5 updated
10 months ago
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Imagine if you mixed these two.......... cancer aside, it might look good.......
![unnamed](https://user-images.githubusercontent.com/10619135/31424728-c63bcd6a-ae29-11e7-98bf-e74050fa14a7.png)
…
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For the development of the costing model, we will need to know what equipment is being used in the course of a model simulation. However, currently this information is not captured. For some HSI, ther…
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I encountered the error when I ran the following:
`ComBat_seq(cts, batch = coldata_filtered$Rep2, group=NULL, covar_mod=cbind(coldata_filtered$Cancer, coldata_filtered$Treatment))`
`Error in qr.defa…
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**Preferred term label:**
distal common bile duct
**Synonyms**
distal bile duct
**Definition (free text, please give PubMed ID)**
The section of the tube-like structure carrying bile that is …