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In several data sources (ClinVar, OMIM, Orphanet), we use the RO_0002200 'has phenotype' relation for linking variants to diseases. This doesn’t seem right, and is not in line with the definition of '…
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### Summary
- What does this package do? (explain in 50 words or less):
The `spatsoc` package detects spatial and temporal groups in GPS relocations. For social network analysis, `spatsoc` can…
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Thanks for developing this package. It has been functioning perfectly so far. However, I have the following issue. My current search via the Scopus search function indicates that there are about 80k h…
Gerwi updated
5 years ago
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To drive the associations tables, it would be useful if Biolink followed the subject object predicate pattern in return objects.
For example:
/bioentity/disease/{curie}/phenotype returns the disea…
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Project search will not return results for any project lacking a description of at least 100 characters. This is a source of duplicate project creation. Perhaps instead of refusing to show search resu…
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We need a new class of annotations which allows us to add a quality to variants such as pathogenic/benign, etc., together with the evidence for the call.
We should consider using the 5-level pathogen…
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Hi,
First of all, thanks for this great work.
I am trying to reproduce the ner task mentioned on your paper. But some key error raised when I try to run following command.
`
./train_allennlp_loca…
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Hi everyone, the 2018 AGU Fall Meeting in Washington, D.C. is just a few weeks away. In this issue, I plan to help coordinate some Pangeo community happenings. I'll keep updating these lists as more d…
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Hi guys,
I'm now using the ABSEIR model to deal with the Hand-foot-mouth disease (HFMD) data in one province of Northwest China at county level, but encounter some problems. My HFMD data were aggre…
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