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bcftools csq (1.10.2) fails with "Error: CDS overlap in the transcript 0: 266-13468 and 266-13483"
for below GFF file. Does this mean that overlapping transcripts are not suported? Could this easily …
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https://ftp.ncbi.nih.gov/snp/latest_release/JSON/
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Targeted Locus Study (TLS) are defined here: https://www.ncbi.nlm.nih.gov/genbank/tls/
Example https://www.ncbi.nlm.nih.gov/nuccore/KBUV00000000.1
```
LOCUS KBUV01000000 3714 r…
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There are 143 cases of "subject not found" during the last data update.
This may be caused by out-of-date background data, e.g. the collection of gene symbols, or some discrepancy in the submission…
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**Original article**: https://www.ncbi.nlm.nih.gov/pubmed/25185810
**PDF URL:** https://github.com/mupsh/ReScience_Qian_2014/blob/master/article/article.pdf
**Metadata URL**: https://github.com/mu…
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**Submitting author:** @kortschak (Robert Daniel Kortschak)
**Repository:** https://github.com/biogo/ncbi
**Version:** v1.0.0
**Editor:** @pjotrp
**Reviewer:** @ngoto
**Archive:** 10.5281/zenodo.…
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**Submitting author:** @akcochrane (Aaron Cochrane)
**Repository:** https://github.com/akcochrane/TEfits
**Version:** v00.77.12
**Editor:** @cMadan
**Reviewer:** @ejhigson, @paul-buerkner
**Archive:**…
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OMIM deprecated https://www.omim.org/entry/611277 and used the name it had had, namely FEBRILE SEIZURES, FAMILIAL, 8, to rename https://www.omim.org/entry/607681, which had been name EPILEPSY, CHILDHO…
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**Are you using the latest release?**
Using version 1.7.2
**Describe the bug**
```
[02:14 PM]: Found 7 clusters, 14 biosynthetic enyzmes, and 19 smCOGs
predicted by antiSMASH
[02:14 PM]: Fo…