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I've come across some strange results while filtering variants from a GATK germline small variant calling run. The full run included 57 WGS and 11 WES samples. In one region on chromosome 1, the final…
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Hi,
I am trying to run Nanocaller using the command :
`NanoCaller --bam _sorted.bam --ref ./sly.fa -chrom ch00 --mode snps --preset ont --cpu 64 --output Nano_Ch00 | tee stdout.txt`
With the sn…
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@trilom this is an excellent example project, I was searching allot for some example showing nested resource paths and this is the only example I found. I wonder if this is not as common scenario as I…
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# Description
When entering a value in a spinner, the formatter is only applied every other time. This is especially evident for clipped values which show the wrong value when you do this, but same…
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The name "Enterprise Contract" was a descriptive name we took on in lack of better options when we started. The name doesn't really roll of the tongue -- we often just say "EC". The word "Enterprise" …
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### Description of the bug
hi,i find
```
process > NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_JOINT_CALLING_GERMLINE_GATK:GATK4_GENOTYPEGVCFS (joint_variant_calling)" going wrong.
…
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**Snakemake version**
### `Snakemake`
> 5.23.0
### Wrapper
**Issue**
I'm trying to adapt my regular VEP code to use the snakemake wrapper instead but am running into an issue.
I …
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## Bug
Calling [aria2-remote.sh](https://github.com/mediathekview/MediathekView/blob/master/res/bin/aria2-remote.sh) (as in commit 9558f62a46cff0b1b8078083629647b5e87e82ca from 2016-01-26) on macOS…
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Hi, I get some rare crash report in Sentry that lead me to an issue in HTTPDataLoader.
I don't know how to reproduce them and I am not sure what's going on.
Note: our app is using the 1.8.1 version…
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### Description of Issue
We are seeing a strange memory leak report when running a binary compiled with Clang's address sanitizer linked with USD v23.11. That is, our code is compiled with address …