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My patched OVS works great with ports created with vale-ctl, but when I tried to attach other ports to the OVS bridge(the physical interfaces or the interfaces within VM), it failed. I got the "failed…
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We need to new button to export statistical analysis result for computer reading.
1. The output file should in .csv format
2. All the analysis result should be in one line.
2.1 There are 2 lines i…
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We incur heavy overhead from queries which find genotypes in which their variants meet a certain criteria. If we were to flatten the genotype schema, query times could be reduced from 130 seconds to 8…
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There is possibility that the upgrade earlier today of bdg-formats and ADAM isn't playing nicely in Mango, though I am still looking into other causes for the error I see. I'm trying to run:
```
man…
jpdna updated
8 years ago
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Suggested by @heuermh, see [here](http://gemini.readthedocs.org/en/latest/content/functional_annotation.html#standardizing-impact-definitions-for-gemini) for examples. This should be added to the Vari…
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Hoping to get feedback/discussion on below:
There remains a substantial chunk of repeating Contig/SequenceRecord metadata that we are carrying around within `AlignmentRecord` RDDs that I am curious…
jpdna updated
8 years ago
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I can't find Pileup class file in org.bdgenomics.formats.avro package. than there is error:
val pileups = reads.adamRecords2Pileup().cache()
:32: error: value adamRecords2Pileup is not a member of or…
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code specific to Dr. Hamet stays in optitherascirpts.
The rest goes into QnGene.
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Since gd.h declares API functions using BGD_DECLARE, then it also has to use that same modifier in .c files as well. ~~I think some paper by Ulrich Drepper~~ [Step-by-step_guide](https://gcc.gnu.org/w…
pps83 updated
8 years ago