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## References
`testthat` [docs](https://testthat.r-lib.org/reference/index.html)
Hadley's [breakdown](http://r-pkgs.had.co.nz/tests.html)
## ToDo
- [x] Add a test for ordination
- [x] Add a…
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There is still an issue with phyloseq and vegan compatibility.
I am trying to run beta diversity measures on data.
This is my code:
bray
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Hi!
Great implementation, its very fast. But I only need to rarefy and not calculate diversity and richness measures. Is it possible to ONLY rarefy and only return the rarefied count matrix in R?
…
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_Note, this task is for Outreachy applicants, and will remain open until the contribution period for Outreachy concludes. Multiple people may complete this task._
## Description
In your own words…
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This doesn't look right
```
In using TLS, the central key schedule of TLS is used. As a result of the TLS
handshake messages being integrated into the calculation of secrets, the
inclusion of t…
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This looks like great code and I would love to start using it for some alpha and beta diversity plots. However, after running
`p ps_trans
phyloseq-class experiment-level object
otu_table() OTU…
hkr01 updated
5 years ago
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The following query:
```
https://api.propublica.org/congress/v1/bills/search.json?query=climate%20change&sort=_score&dir=desc&offset=0
```
Will produce invalid JSON. The first bill returned, `hr…
ndawg updated
4 years ago
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Hi and thank you again for providing GRiD to the community :),
I've been trying to use GRiD for a large scale analysis (thousands of genomes, hundreds of samples with expected high diversity). I fi…
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Thoughts:
There's only quite such an easy correspondance between branch length and # of mutations if we assume all mutations are distinguishable. So to exactly match the branch length statistics, …