ohlab GRiD issues - Githubissues

ohlab / GRiD

Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at ultra-low sequencing coverage (> 0.2x).

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libtinfo.so.6: no version information available (required by samtools)

#32 Sanrrone opened 4 months ago
0
grid single example test errors: sed: 1: "22p": invalid command code ~

#31 giannamars closed 1 year ago
1
dnaA not found dif not found error

#30 wanxn518 opened 1 year ago
0
Problem while installing: Frozen environment and __glibc

#29 JanBruewer opened 2 years ago
1
About the example test: dyld: Library not loaded: @rpath/libtbb.dylib

#28 XIAOBAO-CAI opened 2 years ago
1
how do I pass bowtie2 argument through update_database

#27 jmartin77777 opened 3 years ago
4
What is the suitable normalization method on GRiD score data?

#26 SooChing opened 3 years ago
0
Error: [bam_header_read] EOF marker is absent.

#25 SooChing opened 3 years ago
2
Error file: rm: cannot remove ‘.checkedR’: No such file or directory

#24 ponomarevsy closed 3 years ago
1
errors with grid single and grid multiplex

#23 Mechah opened 3 years ago
2
cannot open the connection

#22 ponomarevsy opened 3 years ago
3
ggplot_build error in single mode

#21 NVOostende closed 4 years ago
4
Can I use GRiD in metatranscriptomic data?

#20 JX-Zhong opened 4 years ago
1
Question about error in grid multiplex-(ERR): bowtie2-align died with signal 6 (ABRT)

#19 mutantjoo0 opened 4 years ago
4
getopt error message

#18 mhyleung closed 4 years ago
6
ggplot build error

#17 susheelbhanu closed 4 years ago
9
Segmentation fault/core-dumping problem

#16 Anto007 closed 4 years ago
4
GRiD values only generated for some MAGs

#15 franciscozorrilla closed 4 years ago
5
Units of GRiD values

#14 franciscozorrilla closed 4 years ago
4
Are GRiD results different between parallel and simultaneous processing?

#13 suzuki-shm closed 4 years ago
2
Issue report: Fatal error: cannot open file 'check_R_libraries.R': No such file or directory

#12 zhssakura closed 4 years ago
2
GRiD value impacted by sequencing depth ?

#11 YU-DENG closed 4 years ago
1
Question on Pathoscope

#10 santoshe1 closed 5 years ago
6
Question on creating custom database

#9 nattzy94 closed 5 years ago
5
Strange results during the refinement step

#8 nigiord closed 5 years ago
2
Implement option -e that defines the reads file extension

#7 nigiord closed 5 years ago
1
allow to start from sam files?

#6 housw closed 5 years ago
12
GRiD on MAGs.fa

#5 mldillon-LBL closed 5 years ago
5
GRiD crashes; Cannot open check_R_libraries.R

#4 nattzy94 closed 5 years ago
0
GRiD crashes; Cannot open check_R_libraries.R

#3 nattzy94 closed 5 years ago
14
generating custum databases for grid multiplex mode

#2 till-bornemann closed 5 years ago
1
Test run (and real data run) crashes on 'unknown aesthetic: outfit'

#1 defleury closed 5 years ago
1