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### **Description**
**Sub-lineage of:** XBB.2.3.3
**Earliest sequence:** 2023-7-31, India, Maharashtra — EPI_ISL_18120271, EPI_ISL_18120272
**Most recent sequence:** 2023-8-8, Singapore (local case…
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_Transferred from sars-cov-2-variants/lineage-proposals#1036_
**Defining Mutations:** `JG.3` > `A22910G(S:N450D)`
**Query:** `C1889T, C7086T, A22910G`
**Earliest seq:** 2023-09-25 (`EPI_ISL_18389…
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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/764
HK.3+C1284T, C23987T,T13324C, C27630T(Orf1a:T340I, S:P809S)
GISAID query: C23987T,G22927T,G13627A
No. of seqs: 88( Cana…
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Taken from Branch 33 of Multitask sars-cov-2-variants/lineage-proposals#537
**Defining Mutations:** **EG.5.1** > `T26171A(ORF3a:M260K)` > `A17615G(ORF1b:K1383R), G22927T(S:L455F)`
**Query:** `G217…
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### **Description**
**Sub-lineage of:** XBB.1* (Possibly XBB.1.28, but I'm not certain)
**Earliest sequence:** 2023-3-27, France — EPI_ISL_17480623
**Most recent sequence:** 2023-4-24, France
**Co…
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Hello,
I have been using freyja and there are some errors that keep persisting due to "--depthcutoff"? It also seems that like the type of error ouptut is related to the version of freyja. It shoul…
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_First spotted by @Over-There-Is_ (edited)
Description:
Recombinant of: FR.1.1 (BN.1.2.3.1.1) and EG.5.1.1* (XBB.1.9.2.5.1.1*)
Breakpoint: S:356-S:368 (nuc:22630-22663, Before = FR.1.1, After = …
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### **Description**
**Sub-lineage of:** XBB.1.16.19
**Earliest sequence:** 2023-8-7, France — EPI_ISL_18215129, EPI_ISL_18215132, EPI_ISL_18228734
**Most recent sequence:** 2023-9-25, France — EPI_…
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@AngieHinrichs, there is a new EG.5.1.3/GK.4 recomb that may be removed by usher, with
GK.4-Orf1b and Spike+478R and other parts being EG.5.1.3. Please keep it on usher.
Belgium/UGent-1525/2023|…
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EPI_ISL_17997249
AY.24, Indonesia, Jakarta, Jakarta Utara — 2023-6-7
I'm still analyzing this one, but I wanted to put in in here for the record. I've probably documented and looked at more chroni…