-
Let's review the `library/ngs-essentials` toolset and extend it with more commonly used bioinformatics application
**Action items**
1. Review tools/versions that shall be added and list them here
…
-
Hi,
I have a design question. My initial reaction to the concept of bactopia-tools and how each subworkflow essentially becomes its own, separate (manual!) command line call was one of "uhm why?!".…
-
This issue is capture and track the last reminaing examples that were not ported[ from the main repo yet](https://github.com/pyscript/pyscript/tree/main/examples):
* [ ] handtrack
* [ ] mario
* […
-
A very common thing in bioinformatics tools, for demo purposes, is to have "example links" that auto fill out some forms and give you the output
In our context, this could be like example sessions …
-
Thinking of adding a sample contamination check into the pipeline to get an assessment on sample purity.
Will become an increasing issue for those playing in microbiome/host genomics. But also for …
-
Hi,
I work on the bioinformatics platform ABiMS in Roscoff, France.
We are interested in your tool RREFinder. To follow our installation policies (we use Conda env), I would like to add your too…
-
##❓ Questions & Help
As we continue building out DeepChem's support for bioinformatics through [DeepBio](https://github.com/deepchem/deepbio), it would be useful to get a sense of:
What are some…
-
We've recently been trying to run CAT and ran into an error when the --augustus-cgp mode is applied. Specifically, we see:
```
“ terminate called after throwing an instance of 'std::out_of_range'…
-
Hi! I'm wondering if you all might be considering a release of the package on PyPI and/or conda-forge?
Happy to help guide the process if a lack of knowledge is the main barrier here, have done thi…
-
Thanks for this great software. And thank you for making a editable version available to the research community. Your papers [1][2] are detailed, complete, and thought-provoking.
When running genew…