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**Premise**
_Sources used: New Notion Club Archives, Tolkien Gateway, MERP #2020 Southern Gondor: The People_
While Gondor is one monolith block (except Belfalas and Ithilien) in terms of cultur…
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Hello,
I discovered a couple of bugs when working with this repo, in the perl scripts which detect the soft-clipped reads and output those as well as their position. The soft-clipped positions on t…
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**Describe the bug**
When GoldenDict tries to index this very large (12G) dictionary, it fails after ~30 mins with error message:
```
"Slob dictionary initializing failed: /home/jrpear/Blobs/enwiki…
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Nice tool, congratulations! I would like to use it on 10x ATAC/multiome data. Could you please explain the following?
1. It would be great to see an example of how to start from `fragment.tsv.gz` s…
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Hello,
I use the CRISPRessoPooled command to analyze several cleavage sites in the bacterial genome. Previously, it was ok, but the Pooled version stopped working at some point. Now I get only this m…
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Add available SARS-CoV-2 data to the pipeline
- [x] @alexsign to produce GPI file
- [x] add to NEO (change config line in Makefile)
- [x] @alexsign to produce GAF/GPAD (this will be mostly interp…
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Should these be described as truncations? (they can still have TEV in the name to distinguish them)
- [x] rec8(TEV),SPBC29A10.14:allele-10,rec8-TEV(cleavable),{db9b5a7b5f36c25c}
(need to edit if…
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Add support for:
- [x] Enzymatic cleavage N-terminal to sites
- [x] Non-specific digest
- [x] No digest
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Hi,
I am trying to use a SBOL glyph to show 2A sequences. Unfortunately, there isn't a glyph for it. The best alternative I can find at the moment is the protein cleavage site. 2A sequences, howev…
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this is the only annotation in this intersection, so it looks odd, but I don't know how to trace the provenence
RPSA | 40S ribosomal protein SA | | cell adhesion | | UniProt | Homo sapiens | IE…