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When I compute a dendrogram of the [CO survey](http://www.cfa.harvard.edu/rtdc/CO/CompositeSurveys/), using the syntax
``` python
>>> from astrodendro import Dendrogram
>>> d = Dendrogram.compute(arr…
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Hello,
I'm using a dataset composed of genes (row) and patient (column), I'm creating the heatmap but then I want to find and save the kmean's values of each samples present in my heatmap. Is it po…
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This is related to the PR I submitted on the old version of astrodendro, but basically: I typically want to run dendrograms on 2D maps to see, as a function of contour level, how much mass is in that …
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Hi,
I was wondering whether it is possible to get the outputs from cluster_map in a form that is customisable? e.g. so that I could change the sample names in the circos plot etc.
Best wishes,
…
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In #6338 we discussed whether we want plotting code in sklearn.
We decided that the answer is yes, and we add a plotting submodule.
I think it would be good to discuss what functions to add.
Here are…
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## Aim
Write a tutorial (with pictures) that explains how nucleotide distance matrices are generated
## Background
Since it is best to start simple and get more complex, we are starting by…
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Hi @talgalili,
Is it possible to combine heatmaply with plotly animations (https://plot.ly/r/animations/)? I.e., could we supply a series of same-size matrices and transition between them using th…
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First off, thank you so much for creating this package. I've been needing something like this and wrote a wrapper with rpy2 but will use this instead from now on.
I am noticing some inconsistenci…
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Hi there,
Firstly, a big thank you to everyone that has worked on updating and maintaining the astrodendro package; i found the tutorial to be very useful and informative at allowing me to understa…
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Hi,
I am looking at a PPV datacube, and the unit of v_cen is not given properly, just in pixels. But I also don't think this is the first moment (the intensity weighted velocity centroid), but jus…