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Hi, I am reaching out to seek clarification regarding an issue I encountered while using the `samtools merge` command in combination with `samtools sort`.
I executed the following command to merge 1…
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### Description of feature
ONT now has a faster tool than `guppy` or `bonito` for basecalling called [`dorado`](https://github.com/nanoporetech/dorado). It is pretty stable and mature now. Please con…
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### 这个功能解决了什么问题？
如果是个多条件查询,除了选择条件,还应该指定排序
### 你期望的 API 是什么样子的？
```javascript
console.log('Hello World')
```
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Guppy is software for Nanopore technologies. To be able to use that in nextflow, I should make a complete container.
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# Issue Report
## Please describe the issue:
Hi, I've been using Dorado for some time and recently tried the updated v5 models with Dorado v0.7.0 for RNA004 basecalling.
When I basecall read…
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Hi,
When I try to use fastqs from dorado --emit_fastq, nanoplexer spits out the wrong format for demultiplexed fastqs where it is missing the name row.
Do you know what the cause of that is? It…
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Hi,
I am interested in context specific methylation events and I am seeing some strange association between the predicted percentage of modification and the coverage at a given site. I followed the…
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# Issue Report
## Please describe the issue:
Hello, As suggested by ONT support, i am submitting an issue encountered while using dorado basecaller.
When basecalling a particular dataset, Dorad…
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If you use HERRO via `dorado correct` (https://github.com/nanoporetech/dorado?tab=readme-ov-file#read-error-correction) it outputs the reads as fasta instead of fastq. Will this pipeline work on those…
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Hello all,
I was curious how actively Bonito is still being used, as I read that Dorado nowadays converted a majority of its neural network code to INT8.
I was interested in experimenting with t…