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https://bioentity.link//#/publication/10.1093/genetics/iyae153
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When we export the gene-pheno associations for owlsim, all we get are transgenes from FlyBase
@jnguyenx and I are trying to debug but SG dev is slow. We have variants like WormBase:WBVar00275325 and …
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Hi Travis,
I continue to love this plugin. While it works great for C. elegans at WormBase, where genes are relatively short, do you have any suggestions for working with mammals, where genes are …
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Because there are relatively few native _C. elegans_ ion channels that have patch clamp recordings in the literature, many channel models will need to be built from homologs in other species. To what…
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Hi,
I'm trying to run rna-seq using star and WBcel235(C. elegans genome), but I'm running in to trouble.
$ bcbio_nextgen.py ../config/seqc.yaml -n 8
I get this error:
GTF not compatible with Qu…
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Author Name: **William Rice** (@wjrice)
Original Redmine Issue: 4973, https://emg.nysbc.org/redmine/issues/4973
Original Date: 2017-05-17
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I would like to be able to upload Helios images t…
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Hi,
I am trying to assemble the genome of a worm, and I was hoping that minipolish would detect the mitochondrial genome and output it in the gfa file.
I have sequencing one of my worm species a l…
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Hi,
I am working with a C. elegans laboratory which performs a large number of RNA-seq experiments. They love your tool, and we appreciate your work to make it user-friendly and to output quality f…
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- process papers after 2009
- Use a different evidence
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I'm not sure if this is a minerva issue or something else, but in a test model, the C. elegans gene pmk-1, is displayed in the table as 'information biomacromolecule' instead of pmk-1.
The label fo…