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I'm teaching shell at GCB Academy's [Introduction to Scientific Computing for Genomics](https://genome.duke.edu/gcb-academy#iscg) next week and was very excited to see this lesson in such good shape. …
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This is a proposal for a genomics use case story for Xarray. The story will be published on Xarray's blog (https://xarray.dev/blog).
### Why?
We've seen Xarray is used in a number of genomics a…
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I got this issue when I tried to parse an excel file, but I'm not sure what caused the issue. Could someone help me with this?
exceljs version: 1.15.0
```
Error: Unexpected xml node in parseOpe…
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Hello, I have the error when running `guidance = scglue.genomics.rna_anchored_guidance_graph(rna, atac)` when using the data provided in the tutorial. The error stated `"sortBed" does not appear to be…
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### Operating System
Other Linux (please specify below)
### Other Linux
Red Hat Enterprise Linux 8.9
### Workflow Version
v2.2.0
### Workflow Execution
Command line (Cluster)
### Other workflo…
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http://openreview.net/pdf?id=Sk-oDY9ge
> Learning tasks such as those involving genomic data often poses a serious challenge:
> the number of input features can be orders of magnitude larger than …
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I would like my registered package, VariantVisualization.jl, to be searchable in the "Genomics" category of Julia Observer. @djsegal referenced this issue ( https://github.com/djsegal/julia_observer/i…
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it will be needed in genomic eda studies.. such as popsets. so we will need a way to have it outside clinepi.
from john "it is still TBD where to send users. My guess is EDA so long as they are able…
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why there's no replacement / Maps to links in the OMOP Genomics?
35986591 OMOP5074729 EGFR protein: Substitution in position 790 Thr replaced by Met measurement
should be Mapped to
19576591 OMOP…
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I put in PR #131 about this in the past and there was some discussion. It was closed I think to help with the lesson migration to the workbench so I'm opening this issue for further discussion.
Al…