-
## Description
I encountered a KeyError when running the statistical analysis method in CellPhoneDB with interaction scoring enabled. I want to gracefully handle missing keys by returning np.nan inst…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/dxd429/mist
Confirm the following by editing each…
-
### Project short name:
CellInteractionsHNSCC
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1…
-
Firstly, thank you for putting together such a useful tool!
Apologies in advance if this is a naive issue as I am relatively new to R and scRNAseq analysis. I am trying to use Lamian to compare pse…
-
To replicate the results, it is not enough to initialize the output matrix with the same random number. I made changes my experimental package to make analysis replicable when `threatds = 1`.
http…
-
When doing an adaptive matrix test from the SPIN runner, the resultsviewer should show the last SNR instead of the average of the last 6 reversals
In addition:
Alles wat boven SRT staat nl. de SNR…
-
I'’m using the `isomiRs` Bioconductor package to analyze microRNAs. I’ve pre-processed the data with the `nfcore-smrnaseq` pipeline, and I’m working with the `export/{sample.id}_mirtop_rawData.tsv` fi…
-
您好，请问一下聚类所使用的Neighbor information.csv和Value similarity data.csv文件是经过什么操作获取？
-
We need to have a formalized version of the privacy matrix (pp. 3-4) for security analysis. So far, it is informal. For now, I don't know how to do this yet, but I already envision a *master theorem* …
-
I came across the following problem when I ran calculate_GFscore function:
GF_df = spotgf.calculate_GFscore(gem_path,binsize)
Calculate SpotGF scores for genes with binsize 77
Process with Bin…