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"MMseqs2 Version: 7e2840992948ee89dcc336522dc98a74fe0adf00"
## Expected Behavior
mmseqs easy-cluster --help
says that running this command
mmseqs easy-cluster /opt/mmseqs/examples/…
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Hi ursky,
Thanks for the cool pipeline! I bumped into an error while running quant_bins:
```
metawrap quant_bins -b BIN_REFINEMENT_95/metawrap_95_5_bins -o QUANT_BINS -a ASSEMBLY/final_assembly…
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## Expected Behavior
Successful create a search resultDB when run `mmseqs search query/queryDB target/tragetDB search/resultDB -s 7.5 --search-type 3`
but fail when run `mmseqs search query/queryDB…
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mmseqs easy-cluster crashes with a very simple file as an input:
```
>UPI0005E38868_574-614
EKVDQNTADITTNTNSINQNTTDIATNTTSINNLSDSITTL
>A0A2T6WYU8_88-128
ENVSQNTADITTNTNSINQNTTDIATNTTNINNLSDSITT…
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This might be true for a few different examples, but if I try:
```
asap-docking cross-docking --ligands input/lig_0.smi --pdb-file input/NP_722463.1_lig_0.pdb --target ZIKV-NS2B-NS3pro --cache-dir p…
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I am attempting to cluster a dataset of ~1.3M backbone-only structures (so all residues are "glycine"), each about 70 residues long. I have made sure all PDBs are well-formed (i.e. have all 4 backbone…
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## Expected Behavior
Test and obtain the expected gene cluster.
## Current Behavior
### using CDS
When I use the gff file generated by prokka, it prompts "Not enough columns in GFF file" `./space…
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Title: Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fu…
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Dear hifiasm developers,
I am fighting to assemble a highly heterozygous plant genome, which seems to have large tandem repeat arrays (500kb-1Mb) dispersed throughout the genome.
When running on…
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## Expected Behavior
I'm trying to run `clusterupdate`, but I'm running into the error:
```
diffseqdbs /ebio/abt3_projects/software/dev/Struo2/tests/output_n10/genes/cluster/genes_db /ebio/abt3…