-
I'm using `Binsanity v0.2.8`
Apologies for all of the activity on here lately. I've been trying to integrate Binsanity into some of the pipelines at my institute. Thought it would to log some of…
-
re: https://github.com/openjournals/joss-reviews/issues/2119
grammar
=======
+ problems with sentence: `This can be calculated intersecting (with bedtools,`
+ "regions between used defined" shou…
-
I noticed there was a tutorial that says you can use `Binsanity-profile` but I'm confused why it needs a fasta file and contig ids when the bam file has all of this information in there.
What forma…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/CenterForStatistics-UGent/reconsi
Confirm the fol…
-
In the QIIME workflow, I am trying to replace the very slow and not appropriate vsearch classification of long-read metagenomics sequencing (ONT) by minimap2 which is very fast for this kind of reads.…
-
### R markdown script in progress: [here](https://github.com/fish497-2019/GraceCrandall/blob/master/scripts/060419-mydata.Rmd)
I want to make a table that has all the unique taxa listed, with their…
-
**planning**
before new year
- in memory index to speed up Unipept database construction from Uniprot + NCBI Taxonomy
- use new indexing in Unipept database construction scripts
- ship rails platform…
-
**future naming of Unipept analysis pipelines**
- [x] _tryptic peptide analysis_ (new name of _single peptide analysis_): taxonomic and functional analysis of a single tryptic peptide
- [x] _metaprote…
-
Thank you everyone for your contributions towards this documentation effort.
Instructions from @vdauwera ~~to follow~~ at [this Google doc](https://docs.google.com/a/broadinstitute.org/document/d/1r…
-