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Hello,
I was wondering if you had any suggestion with an error message I get when I try to run the psite function. This is the error I recieved:
processing nuc_genome_102617_RF-15Dark_Rep1_merged.…
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https://www.pombase.org/gene/SPAC110.06
It's odd. I've never noticed a missing image before.
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Hi,
First - thank you so much for sharing this tool! I'm relatively new to the data analysis world, and your tool helped me understand how to deal with my ribosome profiling results.
There is one pr…
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there was another file for Juans data
Duncan_29432178_2.tx
I checked it in, removed the control characters, but I know realise that I missed out the evidence code which should be
ECO:0000058
…
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I am interested in doing ribosome profiling using NGS data using xtail.
I have latest version of R 3.4.4 and then tried the following command for installation of xtail:
ATTEMPT 1:
> install_github…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/ChrOertlin/anota2seq/
Confirm the following by ed…
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@aadish and I are currently working to bring the memory usage down to an acceptable level (see #50), and by using a canvas for the DNA strand the memory usage has fallen substantially. This appears t…
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The --Offset parameter is indeed a good start, however, offsets are dependent on read length and hence this option should be expanded.
Suggestion: a parameter such as --OffsetList that takes both the…
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Hi,
First I would like to thank you for providing this useful and easy-to-use pipeline. It is a great tool for a biologist like me who has limit ability to write codes. I have used metagene and pha…
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Hi,
First of all, thank you for developing such a great tool.
It is easy to use and very helpful for my analysis.
I'd like to discuss my procedure for P-site estimation using stop codon peaks,…