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This should be possible with the r2dt-web web component :
- https://github.com/RNAcentral/r2dt
- https://github.com/RNAcentral/r2dt-web
- https://r2dt.readthedocs.io/en/latest/widget.html
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The current tRNA (SO:0000253) tree has children for each tRNA isotype plus 'mt_tRNA', but this arrangement has a few problems/deficiencies:
- doesn't clearly distinguish between cytosolic/mitochondri…
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Hello,
I am experimenting with different tools for transcriptome assembly on a data set of RNA-seq reads from tomato I obtained from SRA. I used StringTie to assemble the transcriptome and then ran…
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[GROMACS tutorial](http://www.mdtutorials.com/gmx/complex/01_pdb2gmx.html )
[GROMACS in the Cloud: A Global Supercomputer to Speed Up Alchemical Drug Design](https://doi.org/10.1021/acs.jcim.2c0004…
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作者你好，
请问我在复现实验的时候，出现了eval 和 test的时间很长的现象，这是正常情况吗？
因为数据集和原始数据集有了一些更新，导致出现了很多新的数据（这些数据…
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Hello Jens,
I tried to use gemoma to annotate the genome and
the input format for gff file is the same as the test data so I don't understand why it didn't work out
java -jar GeMoMa-1.9…
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Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
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### **Description**
**Sub-lineage of:** KP.3.1.4
**Earliest sequence:** 2024-6-26, USA, North Carolina — EPI_ISL_19216826
**Most recent sequence:** 2024-7-14, Canada, New Brunswick — EPI_ISL_192840…
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Please, describe below the problem you think we face in the miRNA/isomiR naming.
Try to summarize it in 200 words. The current discussions are here:
* isomirs : https://github.com/miRTop/incubat…
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### Contact Details
mathias.charconnet@live.fr
### What happened?
Hi,
I have been using viennaRNA using sourcecode and python, and there are several interesting options that I could use with th…