-
On opening Data Dashboard for HTAN BU project get a disconnect within a few seconds
```
2022-11-29T10:15:13.294523+00:00 shinyapps[5806160]: WARNING: [2022-11-29 10:15:13] root - For the attribut…
-
Please refer to issue #25 for previous discussions using surface-plasmon resonance. This issue describes updated efforts at establishing a robust biophysical screen to confirm binders to the SARS-CoV-…
-
From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1568
KP.2.2+A28468G(Orf9b:N62S)
GISAID query: A28468G,T21737C,A25359G
No. of seqs: 151(Canada 6 UK 6 Finland 5 France 65 Frenc…
-
Transferred from sars-cov-2-variants/lineage-proposals#2026
KP.3.1.1> C1441T> A26760C(M:I80L), G28423C(Orf9b:R47P)
Query: A26760C, G28423C
Earliest sequence: 07-22 New York City, New York, USA …
-
### Feature Request
We want to switch over from nextclade 2 to nextclade v3.
### Solution
1) re-factor the nextclade json parser script to accomodate the new json format.
2) update the wdl to a…
-
## Tasks
_@victorlin to fill this out_
## Links
- [2021-08-17 take 1](https://github.com/nextstrain/augur/pull/762)
- [2021-08-23 take 2 (moved to ncov)](https://github.com/nextstrain/ncov/p…
-
Thank you for integrating and opensource the Benckmark dataset.
I noticed that there are some inconsistencies between statistics in the paper and the released data in `benchmarks/CodonBERT/data`. He…
-
From https://github.com/sars-cov-2-variants/lineage-proposals/issues/2049
It seems that a lot of new DeFLiRT+DeFLuQE recombinants are submitted these days.
Among them, this seems a very interestin…
-
We have examples where there is an amplicon with two right-hand primers. Neither primer is excluded at the primer/amplicon identification stage, and both are provided to cylon.
Observed behaviour: …
-
I've heard a few folks ask about aerosols in the last couple months. I think our choice so far has basically been to disregard it as a feature or offer people workarounds as 1-1 advice.
Ran across…