-
For first round of integration testing with Kids First, we need the priority 1 fields from sequencing (and maybe 2). These fields include:
### Priority 1
seq_filename
analyte_type
sequencing_…
-
Hello everybody,
I am new in ONT data analysis and I came across your work. I face an issue when trying to run LinDA in MicrobiomeStat using the ggpicrust2 pipeline.
message("Performing LinDA …
-
Datasets where the truth is know...
for automated testing and evaluation of workflows
It will be possible to use the ENA for that (which reflects most but not all of the diversity of sequencing …
-
I thnk that I could model non-methylated Cs as C->T SNPs and Gs as G->A SNPs , but the VCF will be *VERY* large.
Since methylation sequencing is directional, I'll also have to do a second simulatio…
-
In HTAN, we have established an initial approach to mapping the HTAN data model to the latest CDS Sequencing and CDS Imaging templates. @aditigopalan has been critical to this process. Note that the H…
-
I am encountering an issue with basecalling a POD5 skip file using Dorado. I have two POD5 skip files generated during a GridIon sequencing run with a P2 solo attached. These files were generated by p…
-
Hi all,
EagleC had offered structural variants with great precision.
We did a high-depth sequencing of several well-known cell lines to test our hi-c experiments modified from classic in-situ …
-
Hello!
First of all, thank you for sharing IsoLamp with us.
I see that IsoLamp was created for the targeted sequencing, but I have a small newbie question. I was wondering if it would be possibl…
-
### Description of feature
Hi,
Illumina has introduced a new read compression format, ORA: https://www.illumina.com/science/genomics-research/articles/design-ora-lossless-genomic-compression.htm…
-
# Requester information
Please provide the following information:
- Name: Allison Heath
- Affiliations: CHOP/KFDRC
# Request Details
Please provide the following information about what you wantin…