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This is a followup to the closed issue as noted in #291, which can be worked around using the [nf-core pangenome workflow](http://nf-co.re/pangenome/). I have separately confirmed this using the same…
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The following error is encountered when I tried to run
```
>>> fit_sim = fit.FitSimulation(init_sol, obs_df, init_cov, n_iter_max=n_iter_max, de_kernel=de_kernel, nongrav_info=nongrav_info)
```
fo…
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Hi all,
Thanks for this wonderful tool!
We're trying hard to install pycistopic using pip in our cluster (NYGC), but we keep hitting all sorts of errors. We managed to run pySCENIC with singular…
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Does the nibabel.nicom dicom wrapper support multi-frame dicoms with multiple volumes?
I have a dicom with frame index ordering: "Temporal Position Index", "Stack ID", "In Stack Position Number". …
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This is a follow up on the discussion in https://github.com/JuliaLang/julia/pull/32126. Currently, `\` and `inv` truncate the smaller singular values, i.e. it actually computes a pseudo-inverse (or ap…
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### Get the docker image with R libraries ready for running bowerbird
I pull the rocker-gdal-dev-python image from docker hub with this
```
module load singularity/4.1.0-slurm
singularity pul…
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# Short Description of the issue
When applying an image like alpine, the singularity fails to run because it does not know it is a docker image.
## Environment
- Operating System: L…
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### Prerequisites
- [X] I have read the [documentation](https://rjsf-team.github.io/react-jsonschema-form/docs)
### What theme are you using?
antd
### Is your feature request related to a …
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This came up in DPIRD workshop where files put into directories outside the cloned repo directory (eg. put into `../data` instead of `./inputs`) could not be found by `PARSE_INPUTS` -- but once the sa…
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Hello,
I am trying to run the SHARE-Seq pipeline starting from the preprocessing step on an HPC.
- Could someone share an example JSON and other required preprocessing files for starting the ana…