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Hi,
We would like to use the `commands` slot of the Seurat object to keep track of all the parameters used for the different steps during the analysis.
Since we have multi-modal data (cDNA + antib…
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## Erroneous Behavior
It's trying to update `uv` with `self update`
## Expected Behavior
Update `uv`
## Steps to reproduce
`topgrade run uv`
## Possible Cause (Optional)
I…
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It would be useful if we could add the ability to export OpenMM systems with modified `scee` and `scnb` nonbonded scaling parameters. Attempting to convert the AMBER GLYCAM06j-1 glycan force field yie…
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We need to generate a facet search OpenSearch index. The purpose is to resolve targets/diseases from their facets, e.g. search for all the targets where facet is "search term".
There are two indic…
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Not having looked at this repo for a few months, I've discovered some issues which cause confusion:
1) empty values in the database (null) display as the string 'null' and not as a blank field (e.g.,…
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### Project short name:
LungTransplantationCOVID-19
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1LF9_E1iw…
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@rose-higgins reports that R's `here::here()` function works differently in a Codespaces R environment than in a local R environment.[^1] Whilst Rose and Will think the difference is likely because of…
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I noticed this odd BN.1.3.5 singlet sequenced
hCoV-19/France/IDF-APHPSU_PSL-662405025479/2024|EPI_ISL_19193543|2024-05-12
BN.1.3.5 wasn't common in France, much more so in East/South East A…
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This is a bit preliminary, but I wanted to create a space to organize.
There are a few sections that we should probably add to the new standalone vaccine paper:
- Adenovirus-vector vaccines (@nils…
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The HuBMAP SDK has been started and contains a python client interface into the Entity API web service. We'd like to add the functionality of a python interface for the Antibody API web service into t…