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@larrybabb to create a new stand alone sheet called 'CvC annotations log' (discussion from ClinVar Stakeholders meeting 12th Jan 2024). The purpose of this sheet will be to allow all curators to see …
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From the notes of the last user meeting (#1679)
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I run this command
```
running ['oc', 'run', '/tmp/opencravat-open-cravat-1705148005uika61i0/d2c77d62-1e83-4bfb-908e-42230e123649-1705110875/DanteLabs.HG38.bamlane_1.strelka.variants.vcf.gz', '--lif…
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Currently all allele data is stored as a map of `string`: `float` in an `AlleleProperties` message. The size on disk for these is about 60 GB when unpacked (and even this is lightly compressed) and 40…
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https://mp.weixin.qq.com/s/uzjYcJ08D-Y-sDGgUVk26w
ixxmu updated
4 months ago
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**Describe the bug**
The skelleton loader for clinvar submission is always displayed.
**To Reproduce**
Steps to reproduce the behavior:
1. Go to any seqvar/strucvar details page.
2. Scroll …
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View details in Rollbar: [https://app.rollbar.com/a/jimmy.andrews/fix/item/VariantGrid/4630](https://app.rollbar.com/a/jimmy.andrews/fix/item/VariantGrid/4630)
```
UploadPipeline 7933 failed. Filenam…
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It appears that there may be incomplete data in ClinVar.
For example, the variant chr14:g.23885322_23885324del is considered Pathogenic/Likely pathogenic, but is not showing up as such in SEAL.
…
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**Is your feature request related to a problem? Please describe.**
A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
**Describe the solution you'd like**…
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**Is your feature request related to a problem? Please describe.**
We currently do not have a linkout to ClinVar from the seqvar detail page if the variant is not in the local ClinVar copy.
**…