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Perfect families do not seem to be meeting the criterion presented on the PFS. See screenshot below:
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Hi, I would like to rename the GO:0036038 tectonic complex into 'tectonic-like complex'. A new paper published a similar complex which they named
B9 complex (PubMed=22179047) and characterizes its fun…
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Hi,
I try run `uproc-makedb` but it failes:
```
uproc-makedb /data/db/uproc/model/ /data/db/SEED/ProblemSets.2015.11/all.faa /data/db/uproc/seed/ …
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During discussions with SGD, it emerged the difficulty in distinguishing
between SUMO and ubiquitin ligases based on sequence similairty.
Although usually, ubiquitin ligases are RING fingers (or PHD…
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Hi,
I started this discussion on the annotation email list and posting
the message here for further action.
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Hi all,
I'm annotating a gene that encodes a methionine aminopeptidase,
o…
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Hello,
IPR003606 Nuclear protein Zn2+-binding has several
mappings but according to the description the function
of this domain is not well characterized.
Maybe these mappings should be removed? (…
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When on a gene page, we want to see any phenotype/disease associated with any of its orthologs. At one point we were waiting on upgrading solr to join the orthology/gene-phenotype queries.
However, I…
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Hello,
I was wondering whether it made sense to have InterPro
domains mapped to "protein binding" (GO:5515). It seems
to me, all proteins bind something?
For example:
-InterPro:IPR000210 BTB/POZ
…
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Hello,
I am submitting this request on behalf of teammate Dan
Haft.
Dan and colleagues have recently published a paper
describing a set of protein families associated with a
DNA repeat called CRIS…