-
Hello!
I have sequenced 5 samples with barcoding on a R10 flow cell resulting in ~284 GB of fast5 data. I want to analyse this data using our GPU servers (see screenshot).
![2023-02-10 14_47_49…
-
Thanks for a great tool!
We work with Nanopore sequencing, where it is common to ligate sequencing adapters to your DNA. This is preceeded by a PCR that introduces barcodes. After PCR our construct…
-
Hello,
Thanks for providing this tool.
I was wondering if you could provide a test dataset with few fastq files and a database file.
I'm having some problems running the tool using the docker c…
-
Hello vireo developers,
Thanks for creating vireo, it's extremely helpful and easy to use!
I have some quick questions about filtering the donor genotypes file (assuming all donor genotypes are …
-
Hi cutadapt,
I'm writing because I am using cutadapt (see below) and I get output files, but my error log reports the following error (see below).
Thanks for any thoughts or suggestions,
Camil…
-
This is a bit of a broad question, but I am trying to get a better understanding of Sockets on the IP level, and I am having issues instantiating an Ipv4 and Ipv6 Socket. I also can't seem to find muc…
-
Hello,
Is Mixcr suitable for pacbio data analysis. Can I skip assemble and only for clonetyping?
-
Hello,
do you have a preferred way to cite deML?
-
Hi,
Could I please ask you a question here?
After all the steps before, my "PE.sort.bam" includes reads with different length.
e.g., samtools view PE.sort.bam | cut -f 6 | sort -u
*
100M
…
-
Thank you for reading my Issue
I am analyzing scRNA seq data set of almost 8000 cells which contains diverse cell types (T cells, Epithelial cells, Myeloid cells) from breast tissue Hashtaged with …