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_From @fedarko on February 25, 2017 2:25_
We want to be able to distinguish assemblies with lots of tiny components (e.g. biofilm 2) vs. asms with a few large components (e.g. shakya old, biofilm 1).…
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Hi,
I have an intermitent problem with Macs2 callpeak when I use build model. It seems a problem with building model because I have no problem when I use --nomodel and a fixed extend size in the sa…
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_From @olgabot on July 6, 2014 22:55_
Hi @jbenet and @maxogden! Thank you so much for the time you took to meet with @mlovci and me this weekend. Here's an overview of our current data management sit…
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Hello,
I want to create a 2D representation of the network.
Creating squares for each input neuron, output and hidden neurons, as well as creating connection weights by color.
When the network is b…
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Hi,
Just updated from the apt-get-installed 3.6.0 version to the cpanm installed 3.8.0 version and I'm getting a weird issue where Roary, or something in the method, isn't recognising any sequences…
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### my code:
```
plotSpatialScatterpie(
x = spatial_data,
y = deconvolution_matrix,
cell_types = colnames(deconvolution_matrix),
img = TRUE, # TR…
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Could be downstream of https://github.com/tidyomics/genomics-todos/issues/1
Work through multi-sample multi-condition differential test using pseudobulked counts, a la a hybrid of `muscat` and `csaw`
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In the following data: [data.tar.gz](https://github.com/user-attachments/files/16457383/data.tar.gz)
there is exactly one single-end short read in `input.fasta` and two sets of haplotypes, `full.fa.g…