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Hello DRAM developers,
I just found DRAM paper and am trying to use for my analysis.
I installed DRAM into new conda environment following instructions in [wiki](https://github.com/shafferm/DRAM/…
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Hello, not really an issue, more of a request. I really like how Prokka integrates multiple annotation tools and wraps them together to produce an output with all the different types of annotations. I…
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Hi,
I would like to install a local mmseqs server to run lots of predictions with colabfold_batch
it seems that I can't reach the page you mention in the documentation
I am getting : colabfold…
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## Current Behavior
I am getting the following error while doing MSA search over local colabfold db and uniref30 db
## Steps to Reproduce (for bugs)
running pip colabfold 1.2.0
command colabfol…
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## Expected Behavior
I am running colabfold locally on an HPC that is currently not making calls to get MSAs or templates from the PDB70 (will be set up to have databases stored locally soon). As a t…
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```
Floating point exception
Error: comparing both k-mer tables failed
```
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Greetings!
I am now trying to install databases using this functionality. I first edited the yaml, since it asks for ```mmseqs``` [where](https://github.com/PedroMTQ/refdb_generator/blob/main/refer…
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Dear all
We have been encountering issues processing the nr database with the following outputs:
```
aria2c --file-allocation=none -c -x 10 -s 10 ftp://ftp.ncbi.nih.gov/blast/db/FASTA/nr.gz
…
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Hello dev team,
Thanks for your efforts developing and helping the community with Semibin.
I wanted use the single_easy_bin option to bin my co-assembled contigs.
at the beginning I had the same…
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Hi,
So we have been trying to implement the local mmseqs/search, and it is at least for me unclear what is the best setup/config for having this running on a dedicated machine.
Right now we tried…