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Hello,
I am submitting this request on behalf of teammate Dan
Haft.
Dan and colleagues have recently published a paper
describing a set of protein families associated with a
DNA repeat called CRIS…
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Hi,
I try run `uproc-makedb` but it failes:
```
uproc-makedb /data/db/uproc/model/ /data/db/SEED/ProblemSets.2015.11/all.faa /data/db/uproc/seed/ …
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I'd like to add a term describing the assembly of the exocyst, a
protein complex peripherally associated with the plasma membrane
that determines where secretory vesicles dock and fuse (GO:
0000145)…
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Hi,
I am trying to create a compound node and move some elements to that compound node by using eles.move( ) function. I observed that when width or height attribute is set for nodes, eles.move( ) …
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Hello,
IPR003606 Nuclear protein Zn2+-binding has several
mappings but according to the description the function
of this domain is not well characterized.
Maybe these mappings should be removed? (…
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Changes in MHC Terms in MF and CC
Terms relating to MHC class I and class II molecules in the molecular
function and cellular component ontologies need to be revised to
clarify their use and meanin…
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When on a gene page, we want to see any phenotype/disease associated with any of its orthologs. At one point we were waiting on upgrading solr to join the orthology/gene-phenotype queries.
However, I…
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Hello,
I was wondering whether it made sense to have InterPro
domains mapped to "protein binding" (GO:5515). It seems
to me, all proteins bind something?
For example:
-InterPro:IPR000210 BTB/POZ
…
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It seems like M28 is not restricted to proteases....
actually the mapping is from
InterPro:IPR003137 which is PA associated (this isn't the peptidase domain'...anyway there appear to be a number of…
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casein kinase I activity GO:0004681
protein kinase CK2 activity GO:0004682
look like gene products
both EC
2.3.1.37
Reported by: ValWood
Original Ticket: "geneontology/ontology-requests/1257":http…