-
```
What steps will reproduce the problem?
cd "sofia-ml-read-only"
./sofia-kmeans --k 100 --init_type random --opt_type mini_batch_kmeans
--mini_batch_size 100 --iterations 1000 --cluster_mapping_ty…
-
```
What steps will reproduce the problem?
cd "sofia-ml-read-only"
./sofia-kmeans --k 100 --init_type random --opt_type mini_batch_kmeans
--mini_batch_size 100 --iterations 1000 --cluster_mapping_ty…
-
```
What steps will reproduce the problem?
cd "sofia-ml-read-only"
./sofia-kmeans --k 100 --init_type random --opt_type mini_batch_kmeans
--mini_batch_size 100 --iterations 1000 --cluster_mapping_ty…
-
```
What steps will reproduce the problem?
cd "sofia-ml-read-only"
./sofia-kmeans --k 100 --init_type random --opt_type mini_batch_kmeans
--mini_batch_size 100 --iterations 1000 --cluster_mapping_ty…
-
Hello, I am trying to map the coronovirus to reference but stuck at the first step of creating the index files.
the command I use is following: `STAR --genomeDir /ref/SARS_cov_2.fasta --readFilesIn…
-
If I understood correctly, I cannot use lumpy express on a merged bam file with different RGs.
So, I have to have separate bam files (aligned with bwa mem -M -R ) and do this on each:
* Sort & I…
JJBio updated
5 years ago
-
### Description
when loading parquet files, it would be nice if polars could trace which file each row came from
something like
```python
df = pl.read_parquet('*.parquet', with_source_column=Tru…
-
#### What Happens?
Errors in mappings produce an exception. Instead, I was expecting the tool to produce a concrete, explainable error and possibly a line rather than having to read a stack trace).
…
-
Conclusions from: #13
We found that correcting the kmer count by correction = (1-err)^k (count / correction) seems to work out fairly well.
We still need to handle the information loss from th…
-
What's the purpose of .jobf files? I see three points:
1) Exporting renamed class/field/method names. While they can do that, they are quite useless compared to the formats I added support for in #15…