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https://mp.weixin.qq.com/s/jAkmtUW1BS44CWXEAHLzmA
ixxmu updated
1 month ago
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Hi, I am new in bioinformatic field and I am trying to do analysis of RNA seq with zUMIs.
**I wrote the yaml file according the instruction:**
##YAML file- zUMIs.yaml
##########################…
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### Project short name:
HumantCREsAtlas
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1OAMwBTrVRnEsF37GI4…
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There should only be one gff and all of the analyses should be using the same one.
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According to the files I received in the project (GSE229677) I should run fastuniq for PE. Each such file is huge (11 GB) and it seems that I don't have enough RAM on my computer for this purpose (the…
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I am receiving the same error as in #569 though my code is slightly different. I am currently following the [full CellChat tutorial.](https://htmlpreview.github.io/?https://github.com/sqjin/CellChat/b…
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Hi there,
I'd like to try using circompara2 to map circRNA reads in human genome for my RNAseq project. But since my project has over 1000 samples and we've already done the alignment work for mRNA b…
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Hello everyone,
I want to process some bam files in order to get the files to perform ASE with EMASE-zero on cancer RNA-seq samples.
After installing alntools through a conda environment I tried e…
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Dear @ronammar,
I am very grateful for your tool. In particular, I was using the plotting function for analytics since I have some low-input (lower-quality) RNA-seq data and was comparing the densi…
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We need a list of BCOs that can fulfill two main functions:
- [ ] Exemplar BCOs referenced in publications
- [ ] BCOs that have important features for testing to be included in the example DB
@t…