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@simonjupp
@zoependlington
@smnorthen
@d0choa
To make a long story short, while working on Open targets therapeutic areas, we had trouble with terms like 'disease of ear', 'nose disease', 'tongu…
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the current pipeline assumes that the base ontology should have subclasses up to a COB. This works for some ontologies like uberon, where imports are only used as referents in existentials but not as …
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This is a companion issue to:
- #1443
But that issue focuses on **injection** which I define as adding axioms **about** terms another ontology (this is clearly defined in that issue, don't brin…
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https://github.com/obophenotype/xenopus-phenotype-ontology/issues/50
Any input on this appreciated.
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https://biology.stackexchange.com/questions/72015/are-the-transverse-septum-in-sharks-and-the-diaphragm-in-mammals-homologous-stru
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Currently some ontology source files fail `validate-profile --profile DL`
- uberon
- envo: https://github.com/EnvironmentOntology/envo/issues/1334
This is because any undeclared annotation prop…
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In order to implement reasoning (#3), we will need to produce an OWL property restriction corresponding to each phyloreference in a PHYX file. For the purpose of explaining how phyloreferencing works,…
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Related to https://github.com/geneontology/gocamgen/issues/36 in that this report will become a normal part of the test load process.
In the meantime, we can begin the regularly scheduled pulling o…
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Once this is merged: https://github.com/ontodev/robot/pull/481
We can add standard TSV products. I would propose that a TSV is made for every product - e.g. subsets, base file, basic, merged
Not…
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I am struggling with the properties and individual queries. If I use the example to query a term, that works fine
```
GET /api/ontologies/{ontology}/terms/{iri}
```
and
```
curl 'http://www.ebi.ac…