obophenotype upheno issues

obophenotype / upheno

The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

https://obophenotype.github.io/upheno/

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issues

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Fix capitalisation typo in increased ccc count pattern

#950 matentzn opened 4 days ago
7
Consider creating all Uberon system level phenotype classes manually for uPheno

#949 matentzn opened 1 month ago
0
Ensure that all TOP level HPO and MP terms have corresponding uPheno classes

#948 matentzn opened 1 month ago
10
Investigate why "uPheno:circulatory system phenotype" and "uPheno: integumental system phenotype" do not exist..

#947 matentzn opened 1 month ago
2
CHEBI IDs used by HPO and other phenotype ontologies do not match those used by GO, RHEA, UniProt

#946 cmungall opened 1 month ago
2
Update outreach.md

#945 ar-ibrahim closed 1 month ago
2
Update outreach.md

#944 ar-ibrahim closed 1 month ago
0
Some plural labels do not work

#943 matentzn opened 2 months ago
1
Documentation: Dead link to OLS

#942 hansenp opened 2 months ago
1
Obo academy apr24

#941 jamesamcl closed 2 months ago
0
Obo academy apr24

#940 jamesamcl closed 2 months ago
0
updates for obo academy apr 24

#939 jamesamcl closed 2 months ago
0
Suggested changes

#938 rays22 closed 2 months ago
0
Update docs

#937 matentzn closed 3 months ago
0
Update phenotype docs

#936 matentzn closed 3 months ago
0
RPPR stats OBA

#935 matentzn opened 3 months ago
0
Updates docs

#934 matentzn closed 3 months ago
0
Upheno mappings and utilities (WIP)

#933 matentzn opened 3 months ago
0
Create a uPheno release product for data analysis

#932 matentzn opened 3 months ago
2
Request new pattern for Incomplete structure

#931 LCCarmody opened 4 months ago
4
Add page documenting stakeholder meetings to documentation

#930 matentzn closed 3 months ago
0
Failure importing http://purl.obolibrary.org/obo/upheno/upheno_root_alignments.owl

#929 haideriqbal opened 4 months ago
4
Map APO entities to OBA / GO (or whatever else)

#928 matentzn opened 5 months ago
5
Map APO modifiers to PATO

#927 matentzn opened 5 months ago
10
Change ZP:phenotype to 7 digits

#926 matentzn closed 5 months ago
0
test cases to compare characteristic of vs characterisitc of part of

#925 sbello opened 6 months ago
2
new pattern: abnormallyAbsenceRateOfBiologicalProcess

#924 pfey03 closed 8 months ago
1
new pattern

#923 pfey03 closed 8 months ago
0
Use case discussion for paper / + outreach group

#922 matentzn opened 9 months ago
0
MP-HPO phenotype alignment: check if axiom matches agree with text definitions

#921 rays22 closed 9 months ago
6
Replace owltools remove-redundant-inferred-super-classes with robot r…

#920 jamesamcl closed 1 year ago
0
upheno.owl cannot be parsed with Pronto

#919 Zethson opened 1 year ago
4
Versionized download links

#918 Zethson opened 1 year ago
1
Documentation request: comparators in phenotype definitions

#917 matentzn opened 1 year ago
0
Documentation request: "Normal" phenotypes

#916 matentzn opened 1 year ago
0
Update dos-dp template workflow document

#915 rays22 closed 11 months ago
0
Update abnormalConstrictionOfAnatomicalEntity.yaml

#914 ar-ibrahim closed 1 year ago
2
Abnormal constriction of anatomical entity pattern template

#913 ar-ibrahim closed 11 months ago
0
Dealing with GO obsoletion cell death

#912 sbello opened 1 year ago
0
Add new editors workflow document

#911 rays22 closed 1 year ago
3
We documented the editors’ workflows for maintaining phenotype patterns and harmonizing

#910 matentzn closed 1 year ago
0
Create a basic Upheno toolkit for bioinformaticians

#909 matentzn opened 1 year ago
0
Create attributeNormal.yaml

#908 Daniel-Olson opened 1 year ago
0
Create attributeSeverity.yaml

#907 Daniel-Olson opened 1 year ago
0
create a pattern for biological attribute severity

#906 Daniel-Olson opened 1 year ago
2
Add new partial pattern to help queries

#905 rays22 opened 1 year ago
4
create a pattern for adding anatomy subclass axioms

#904 sbello opened 1 year ago
1
Create a proper APO integration

#903 matentzn opened 1 year ago
0
update the pattern matches

#902 sbello opened 1 year ago
1
Add SOP docs for all uPheno social workflows

#901 matentzn opened 1 year ago
2