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I found some reads from a LSK114 4kHz simplex run that looks like chimeric duplex reads
Some reads that looks like chimeric duplex reads I extracted from bam:
5adb583a-d4a1-4fbd-8bf6-94f9a5b71cbf …
ymcki updated
3 months ago
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Dear Dorado Team,
I was just wondering about your plans to support older generation NVIDIA GPUs in dorado.
Reason is that the High Performance Cluster I have access to currently still runs NVIDIA …
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Hello, the doc suggests only Guppy5+ are supported, but it's unclear to me if it means "higher version of Guppy" or "anything coming after". Since Dorado has an error profile that is quite different f…
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Hi
I am having this error message in the middle of a basecall + alignment process : terminate called without an active exceptions
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I updated dorado from 0.3.4 to 0.4.3 because I wanted to demultiplex my samples which worked quite well but when I now try to basecall data in duplex mode the performance is so bad. Also basecalling i…
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# Issue Report
## Please describe the issue:
This seems to be a strange edge case, but sometimes dorado (0.5.3) seems to not be able to resume properly, especially from mixed pod5 files.
I f…
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Hi,
I'm working on cDNA reads and I'm considering not using a reference during the basecalling and just outputting an unaligned BAM file. Am I correct in thinking that the unaligned BAM file will st…
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Hi all,
I have been using megalodon so far for calling 5mC modified bases. Since the new release of Dorado I have been exited to try and compare it to my earlier called modification results. As I …
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Hi dorado team !
I am using the latest version of dorado on a Nvidia A100 card, which is supposed to be what dorado is optimised for.
I would like to ask for some advices (if possible) on how to…
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I have tried dorado-scheduling with ultrasat as mission. The skymap was taken from ligo data. The .sh file used is attached
[test_dorado3.txt](https://github.com/nasa/dorado-scheduling/files/13328991…