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There are bits of code around for adding a fluorescence filter cube for epifluorescence imaging. However, this is not documented in the assembly instructions (because it's probably too confusing). I…
rwb27 updated
5 years ago
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Is closely related to C. bot and C. sporogenes but is its own species
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Dears,
using this:
```
python /home/Kaptive/kaptive.py -a GCF_001373075.1_PRJEB8210_assembly_1_genomic.fna.gz -k /home/Kaptive/reference_database/Klebsiella_k_locus_variant_reference.gbk -o /ho…
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Hi there
I would like to thank all the AnnoSINE developers !
I'm trying to run this software on Ubuntu Linux, and it seems that the code as optimized for MacOSX.
trf and irf binaries should be co…
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Hi,
While I was downloading from the datasets CLI I found out that the fasta sequences are downloaded both for `GenBank` and `RefSeq` accession starting from **GCA** and **GCF** while the annotation …
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Hi there,
I am seeing very low mapping rates (~10-15%) for my whole genome sequencing data using Kraken 2. Samples are gut microbiome samples from patients with heart disease, sequenced on Illumina…
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I'd like to have the genome for Patiria miniata registered for the purpose of forging a BSgenome package. The assembly is ASM1570657v1 (Pmin_3.0) and below is the link to the NCBI page:
https://www…
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Hi,
When I was using mason_simulator, I got Segmentation fault (core dumped). My command is:
```
mason_simulator -v -ir GRCh38.primary_assembly.genome.inserted.fa --num-threads 32 --num-fragments …
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Hello, I encountered a problem when running the following command using this software: "/project/GGL/datasetsdownload/datasets download genome accession NC_001740 --filename NC_001740.zip". The proble…
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Should be a program for that...
sr320 updated
2 months ago