-
This is not so easy, but in order to submit complete info via clinvar variant submission files we need to add the refseq version to the submission. So far we save in Scout just the refseq code. Maybe…
-
Start with Why Use GEOME?
- Projects can enforce their own data standards
- Complies with open data standards for geographic metadata
- Expedites genbank/NCBI submission by creating upload ready fi…
-
(python2) [root@localgc 1Genome_quast_introduction]# funannotate test -t annotate
#########################################################
Running `funannotate annotate` unit testing
Downloading: …
-
@gkos-bio commented on [Wed Feb 08 2017](https://github.com/opentargets/data_pipeline/issues/75)
none of the C9orf72 clinvar reports (https://www.ncbi.nlm.nih.gov/clinvar/?term=C9orf72%5Bgene%5D) sho…
-
**Submitting author:** @stfbnc (Stefano Bianchi)
**Repository:** https://github.com/stfbnc/fathon.git
**Version:** v0.1.2
**Editor:** @mbobra
**Reviewer:** @ali-ramadhan, @ashwinvis
**Archive:** 10.5…
-
**Are you using the latest release?**
Not sure about the version of latest release, but I am using version 1.5.0
**Describe the bug**
Basically speaking, I have a successful fuannotate run, and a…
-
Hi Florent!
Thanks for implementing and explaining the new HPC scripts here: https://github.com/flass/pantagruel#hpc-scripts-submission-of-intensive-tasks-to-high-performance-computer-clusters
I…
-
Dear OBO-Discuss,
We are creating the Medical Action Ontology (MAxO), and we would a prefix and PURL in OBO.
Basic information:
--
Requested Prefix: MAXO
Ontology Title: Medical Action O…
-
BLAST options error: File /home/teacher/CasLocusAnno/temp/NC_003071.7-2chr.fasta.neighbor is empty
Traceback (most recent call last):
File "CasLocusAnno.py", line 558, in
File "CasLocusAnno.py…
-
**Describe the bug**
Hi Jon, when I'm doing NCBI genome submission, Validation error picked up an error like so:
For example, there are ~400 cases of "SEQ_FEAT.CDSmRNAXrefLocationProblem" in one -50…