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Short info: `MsBackendMsp` adds support for files in MSP format to the `Spectra` Bioconductor package and hence allows to import and export mass spectrometry data from (to) such files.
Update the f…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/elolab/RolDE
Confirm the following by editing eac…
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Hi,
I have proteomics data which is in .csv format. In the file, I have different comparisons. I have fold change and p-values from my analysis and gene names in separate columns. I want to use enhan…
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Hi,
I'm following your Nature protocol Reimand et al., 2019 to analyze my mass spec data and it's really helpful :)
I would like to ask you which data are required to generate the expression file…
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https://mp.weixin.qq.com/s/GvACsNMCDL4OKSsqX8i9zA
ixxmu updated
2 years ago
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Hi all,
I am trying to use feature detection function (pyOpenMS 2.7.0) to detect "low abundant" small molecules in non-targeted analysis data (I do not have any list of target m/z. Trying to colle…
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The current v2 models repository contains a root `BEACON-V2-Model` directory, in which one finds directories for the individual schemas and their endpoints. The schemas themselves are named e.g. `bios…
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Hi there,
I just want to say first that this is **not an issue or bug.** Just hoping to get some thoughts/opinions.
I have been following the MaxQuant group's method of incorporating a subset o…
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In GitLab by @mkuhring on Jun 1, 2018, 15:39
I think we already had this in the prototype. Basically, it would be nice to access the landing zones from the project top level (were we have landing_zon…
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https://mp.weixin.qq.com/s/r4RItSepToYCnJrTO2lfsg
ixxmu updated
2 years ago