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I tried to run my own data on different servers, but all reported the same error, just in case
![image](https://github.com/StatBiomed/CamoTSS/assets/82215507/6d3c3277-c7fa-4e26-a224-e9ee7551e774)
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Hello, I am using rMATS and my BAM files were processed without any issue but the output has only header except some GTF files
[alghn0a@login509-02-l bams2]$ python $rMATS/rmats.py --b1 trynova…
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Hi
I am trying to run clipper on Drosophila data, providing a GTF instead of a species -s option.
(Cou you provide information on how to construct a species file for other model organism)
In a test …
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When we are importing a GTFS file with exceptions schedule, none of them are present in the application...It seems that all the data have been lost during the import process.
Calendars (all of them ?…
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## Question
What % of Californians have access to GTFS-Flex data?
## Metrics
* The % of Californians that are within areas defined in the locations.geojson file of feeds with GTFS-Flex data.
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I see the main Gtfs struct has fare_attributes, but not fare_rules.
I see the specification has this csv file (https://developers.google.com/transit/gtfs/reference#fare_rulestxt). Is there any rea…
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This GitHub issue exists to give an overview of features that would extend MOTIS in a valuable way. If you want to discuss a specific feature in more detail, please open a separate issue. I will link …
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**Describe the bug**
I am getting Undefined subroutine error messages after running agat_convert_sp_gff2gtf.pl.
**General (please complete the following information):**
- AGAT version: 1.2.0…
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When a user clicks on hello@calitp.org from any of the CTAs on calitp.org, we should prefill a message so the sender saves time + Cal-ITP CS team can efficiently route their inquiry.
**Subject Line…
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STAR by default does not support gzipped FASTAs and GTFs. So the WASP subworkflow just fails if the user provides files that are gzipped. But it would be great if the pipeline automatically handled th…