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An ongoing frustration for batch systems is that Linux gives us ways to limit the amount of cpu that the processes/threads in a job use, but no standard way for the batch system to hint to the job how…
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Greetings @brianjohnhaas,
I am trying to run trinity on my institute HPC using singularity. I have succeeded for many times, but recently, there is a possibility of failure. It says all commands co…
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Hello
I tried to use this function to open a .zarr file I had generated using BigStitcher-Spark on a Linux cluster. Fiji closed with the following error:
```
terminate called after throwing an …
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Dear author,
When I run the command: ```snakemake -p -s /data/01/p1/user208/wn/phyloacc-out-08-25-2024.11-57-51/phyloacc-out-08-26-2024.08-31-18/phyloacc-job-files/snakemake/run_phyloacc.smk --config…
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we working on an HPC without root and network and I often get the following message, does this mean that my cache calls are failing.
we using the singularity method of task execution
```
cromwell-s…
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I'm getting asked about installing on Open SUSE. While I see that you can install RPMs on SUSE systems, I'm not sure if it's very easy to do using el distributions.
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## Images
### mysql
- [x] volume mount database files for host not to edit it easily and opportunity to do it is rare
- when using it in other host, share database via temporary container
- [x] …
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Hi,
I was playing around with quantifying the differences between my duplex reads and the simplex parents and I stumbled upon an issue where the duplex read is longer than a simplex parent (in som…
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Hello, I love this extension and have been very excited to use it!
However today I have encountered the following error when running the default planner:
Starting search with IW (time budget is 60…
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Hello,
I try to open some .h5 files in Jupyterlab 1.2.5 and jupyterlabhdf 0.3.0 but this error appears:
Directory not found "hdf:"
I have jupyterhub running remotely in a linux machine.
…