-
In my software I programmatically retrieve HP via passing the IRI to OWL API (`http://purl.obolibrary.org/obo/hp.owl`). Fairly frequently my script fails with a loading error for HP. This doesn't real…
-
```
Ontology Title:
The Genotype Ontology (GENO)
Description:
GENO models genetic variation in a way that mirrors the conceptual components
implicit in genotype representations - from a full genot…
-
Tubular bones can be further subdivided into short tubular bones (e.g. phalanges) and long tubular bones (e.g. femurs). HP:0003026 (short long bones) has the synonyms short tubular bones and shortened…
-
Current docs state:
```
/**
The ID defined by the external onotology source.
(e.g. `http://purl.obolibrary.org/obo/OBI_0001271`)
*/
string id;
```
This is fairly open ended and we can imag…
-
we need to have some examples of how to model promoters of one gene driving the expression of another.
for example, there is a zfin construct [Tg(zp3:fsta,myl7:EGFP)](http://zfin.org/ZDB-TGCONSTRCT-…
-
The docs for `OntologyTerm.id` read as follows:
```
Ontology source identifier - the identifier, a CURIE (preferred) or
PURL for an ontology source e.g. http://purl.obolibrary.org/obo/hp.obo
It…
-
References to Google Code should be removed
This one has been commented out
but it would be nice to know if it can be replaced before it is deleted
```
dipper/sources/ZFIN.py:
# old 'url': '…
-
Group phenotypes by trait ontology/enivornment ontology
Display tree for the ontologies
timeu updated
7 years ago
-
ID FYPO:0001248
Ontology fission_yeast_phenotype
Term name abnormal regulation of mitotic DNA replication initiation
does not show when looking at
ID FYPO:0001344
Ontology fission_yeast_ph…
-
Hello -
We are importing pato into another ontology, along with several other OBO ontologies. The other imports' namespaces resolve to http://www.berkeleybop.org/. the PATO namespace points to a 404 …