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Hi,
I am attempting to use antigen garnish to predict neoantigens from fusion proteins predicted by arriba/starfusion/fusioncatcher.
I took the predicted peptides from those programs (quite long, mi…
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Like if someone writes a query that's too short etc... uses a wrong character idk
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Coronaspades' gene_clusters file are here: `s3://serratus-public/assemblies/dicistro/gene_clusters/`
Other coronaspades files: `s3://serratus-public/assemblies/dicistro/other/`
4921 assemblies mad…
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Remaining cases to fix, identified in #28146:
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MetaCyc:BUTYRATE--COA-LIGASE-RXN, MetaCyc:,http://purl.obolibrary.org/obo/GO_0120515;http://purl.obolibrary.org/obo/GO_0031956
id: GO:0120515…
sjm41 updated
3 months ago
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Quantitative Behavior of Mass Spectrometers
To apply the theory we learnt in the last chapters of this unit to quantitative analyses with mass spectrometers, we need to think about the limitations th…
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Hello!
ESM2 uses rotary embeddings (even though it has a normal position embedding matrix it doesn't use it), so ESM2 **has no max length**. This is a very common misconception in the field, and th…
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**Description**
Numbering of amino acids in output of ivar variants doesn't account for strand and therefore returns incorrect numbering for genes on - strand.
**Command to reproduce behavior**
…
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for summarizing query path results during evaluation. For example, annotating pathway figures with terms from the Pathway Ontology will allow BTE users to filter genes by hierarchically-organized path…
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**HPO term**
acidosis: 'has part' some
('increased amount'
and ('characteristic of' some
('chemical entity'
and ('part of' some 'bodily fluid')
and ('has r…
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i have compareCluster enrichKEGG and enrichGO results with same input.
and i want to show 2 different results in one dotplot.
how to merge multiple compareCluster results?