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Hi Christoph,
First of all a big bravo and thank you for writing such an interesting book and making it open to everyone!
I would suggest adding a section on generalized additive models, althou…
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Hi,
I'm trying to run MOFA with GISTIC CNV data and vst transformed RNA-seq data (DESEQ2), and if I set the dropfactor threshold to 0.01 and tolerance to 1.0 for TrainingOptions, at some point, I c…
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I think these three methods should return the same results, however, `standardize_parameters()` differs (for *factors*).
``` r
library(lm.beta)
library(sjstats)
library(parameters)
#>
#> Atta…
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Hello @daquang,
Thank you for making your code available. We've been experimenting with YAMDA and have been running into some difficulties on relatively straightforward datasets like CTCF. To demon…
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I'm excited about using TF Probability to the research work I do in education (formally called "institutional research"), and have been developing a system using wide and deep TF.
What I've been …
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Hello Dr Kurtz,
A few questions, I notice that in the tutorials, you use _lambda.min.ratio_ and _nlambda_ parameters. I tried to open the help page for spiec.easi (_?spiec.easi_), but these two par…
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Hi there!
First of all thanks for publishing the code! I really enjoy this work :-).
I would like to ask if you could maybe share the exact parameters you used to create the network that produces …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Caleb-Huo/AWFisher
Confirm the following by editi…
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From https://github.com/marcotcr/lime:
> This project is about explaining what machine learning classifiers (or models) are doing. At the moment, we support explaining individual predictions for text…
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I have a resource, and want to be able to share information about it in a variety of different ways.
- Representation is a tough word to deal with. Semantics of the word representation is differe…