bioFAM MOFA issues - Githubissues

bioFAM / MOFA

Multi-Omics Factor Analysis

GNU Lesser General Public License v3.0

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issues

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No gene is appearing in plot_enrichment_detailed

#69 priyatamapandey opened 1 month ago
0
Vignette html flies not accessible

#68 NadjaBrun opened 3 months ago
0
Archive this repo

#67 artur-sannikov opened 4 months ago
0
'MOFAtools'

#66 yuan596 opened 2 years ago
0
predict function should use S3 dispatching

#65 sthawinke opened 3 years ago
0
Error in py_call_impl(callable, dots$args, dots$keywords) : UnicodeEncodeError: 'ascii' codec can't encode character '\u03b5' in position 5: ordinal not in range(128)

#64 ClaireXinSun opened 3 years ago
0
Problem to use plotVarianceExplained object in ggplot2

#63 Chenjiani1112 opened 3 years ago
0
Problem to use mofaOBJECT

#62 geraldocantelli opened 3 years ago
2
Thanks. another problem on running MOFA

#61 Chenjiani1112 closed 3 years ago
0
Different data processing on metabolomics, I get different R2.

#60 Chenjiani1112 opened 3 years ago
7
AssertionError: dimensionality mismatch

#59 wjddyd66 opened 3 years ago
1
error message: mofapy package not found.

#58 squirrelB closed 3 years ago
2
Failure to Capture Common Sources of Variance in Data

#57 whitleyo opened 4 years ago
1
Error in py_call_impl(callable, dots$args, dots$keywords) : AttributeError: 'NoneType' object has no attribute 'getExpectations'

#56 FfKB opened 4 years ago
1
Issue with runMOFA(object)

#55 vd4mmind closed 4 years ago
1
Question on initialization

#54 BennyStrobes closed 4 years ago
2
MOFA2: IndexError: list index out of range

#53 chrarnold closed 4 years ago
1
plotDataHeatmap() error with correlation but not with euclidean distance

#52 merlevede closed 4 years ago
2
Documentation missmatch for getDefaultModelOptions()$numFactors

#51 frederikziebell closed 4 years ago
1
AttributeError: module 'mofapy' has no attribute 'core.entry_point'

#50 dfermin closed 4 years ago
4
Improving memory efficiency for CITE-seq data analysis

#49 LTLA closed 4 years ago
5
errors in installing MOFA

#48 zjwzzzz closed 4 years ago
2
ERROR in

#47 huyoujinlab closed 4 years ago
0
Error in if (any(r[[i]] > cor_threshold)) { : missing value where TRUE/FALSE needed

#46 PietroD closed 4 years ago
3
plotDataHeatmap() plots interpretation

#45 merlevede closed 4 years ago
5
Likelihood for methylation data

#44 merlevede closed 4 years ago
7
Range of total variance explained per view

#43 merlevede closed 5 years ago
4
Enrichment analysis with HUGO symbols

#42 merlevede closed 5 years ago
2
How can I extract the gene sets with larger weights in the factors?

#41 nnlrl closed 4 years ago
2
function "plotTilesData" not included in MOFA package from BiocManager

#40 SBassler closed 5 years ago
2
Error when creating object from MAE

#39 andreanuzzo closed 5 years ago
3
Failure to install with custom python

#38 s-andrews closed 5 years ago
2
plotEnrichmentHeatmap doesn't pass arguments to pheatmap

#37 emdann closed 5 years ago
1
Do added Markov Blankets get passed over?

#36 vsomnath closed 5 years ago
3
Missing for loop

#35 vsomnath closed 5 years ago
2
Error in py_call_impl(callable, dots$args, dots$keywords): TypeError: Cannot cast ufunc add output from dtype('complex128') to dtype('float64') with casting rule 'same_kind'

#34 jonathanronen closed 5 years ago
5
Truncated feature names after runMOFA

#33 fanli-gcb closed 5 years ago
2
Fix dropping of more than one factor

#32 brandoninvergo closed 5 years ago
1
Error in py_call_impl(callable, dots$args, dots$keywords) : SystemExit: None

#31 ulexis99 closed 5 years ago
2
Error in py_get_attr_impl(x, name, silent) : AttributeError: module 'mofapy' has no attribute 'core.entry_point'

#30 ulexis99 closed 5 years ago
7
Trouble Installing MOFA in R

#29 AmyLei96 closed 5 years ago
4
Feature request: FSEA direction of pathway/factor association

#28 whitleyo closed 5 years ago
2
Endless Removal of Factors

#27 whitleyo closed 5 years ago
6
ValueError in getLvIndex

#26 jonathanronen closed 5 years ago
2
License?

#25 vijay-10x closed 5 years ago
2
Error in py_call_impl(callable, dots$args, dots$keywords)

#24 CarlBrunius closed 5 years ago
6
Error in py_call_impl(callable, dots$args, dots$keywords) : SystemExit: None

#23 brickyyyy closed 5 years ago
5
Error in runMOFA function

#22 ashishjain1988 closed 5 years ago
6
BLAS libraries use maximum number of available cores.

#21 sritchie73 closed 5 years ago
2
Training and validation set

#20 anso-sertier closed 5 years ago
1