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I created a genome group, clicked on it when deploying the PFS
 is listed in the PAINT family nodes statistics spreadsheet with the note "GAF file only".
This family used to be part of PTHR23413, which was 60S RIBO…
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I was annotating a gene product that interacts with
the glucocorticoid receptor and synergistically activates
transcription. GO has the glucocorticoid receptor
activity - GO:0004883 - but not rec…
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```
This is what I try:
> interproscan.sh -i test.fa -f tsv --goterms --pathways
Welcome to InterProScan 5RC4
Running the following analyses:
[jobProDom-2006.1, jobPanther-7.2, jobGene3d-3.3.0, jobSMA…
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A couple of users complained that their private genome don't appear in the protein family sorter.
The reason was that in PFS default is PLfam, and it is not computed for the private genomes, yet.
T…
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Hi,
Could I please have as a child of :
GO:0001819 positive regulation of cytokine production
>GO:New positive regulation of interleukin production
>>GO:NEW positive regulation of interleuk…
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GO term: snoRNA transcription
GO id: GO:0009302
Definition: The synthesis of small nucleolar RNA
(snoRNA) from a DNA template.
Many snoRNAs are generated via processing from introns
of protein co…
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re
#
Hi Val
Just in case you haven’t seen the news, we have finally released Pfam 28.0 on the old website.
I expect you may find that many of your proteins are no longer in their families, so plea…
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I think this is probably an issue in GO but PKA, PKC, and MAPK are all listed as synonyms on GO:0004674 "protein serine/threonine kinase activity" which is incorrect and their actual protein entities …
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Hello,
It happens rather frequently that PAINT annotation matrices do not load at all, or load partially. An example is PTHR11442, that I tried loading today (2016/06/17) several times. Until 9 AM C…