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I started getting an error this morning, which indicates the oaths in the FANTOM database have changed.
Code:
```
library(annotatr)
annot
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Dear package developer,
Good day. I have been trying to use the importRdata() function and I cannot seem to make it work. I use the Homo_sapiens.GRCh38.100.chr_patch_hapl_scaff.gtf.gz GTF file from…
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**Describe the bug**
Installation fails on Debian 11 (bullseye) for sf v1.0-10.
**To Reproduce**
Execute
```bash
docker build -t r/geospatial .
```
with the following `Dockerfile`:
…
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Hi,
Firstly, thanks you for developing the R package. I am confused with the coordinates of the EventPointer output.
I run the example code from https://bioconductor.org/packages/release/bioc/v…
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Hello! I hope the developers can help me with this issue. I've been trying to install `rhdf5filters` because it is a dependency for `rhdf5` library. However, when I try to install `rhdf5filters` I s…
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**Attach your log file**
[ArchR-addImputeWeights-55e3166a2de-Date-2023-01-25_Time-17-05-58.log](https://github.com/GreenleafLab/ArchR/files/10504100/ArchR-addImputeWeights-55e3166a2de-Date-2023-01-…
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I think we can use `remotes` in DESCRIPTION to install rhdf5 from bioconductor, rather than requiring users to do:
setRepositories(ind = 1:2)
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**Attach your log file**
[ArchR-createArrows-3c00321fe031-Date-2023-01-29_Time-08-02-41.log](https://github.com/GreenleafLab/ArchR/files/10529817/ArchR-createArrows-3c00321fe031-Date-2023-01-29_Time-…
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Dear Catalyst R package group,
Thanks for a great analysis tool. I thought to reach out related to question on heatmaps.
I am working with cytoff data and read data with read_steinbock function as…
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Hello, and thank you for an excellent package - I've gotten a lot of good use out of it so far.
I have a merged CellChat object built from four separate conditions that I'm trying to do comparativ…