-
Hi there,
I'm trying to run LILO on a SLURM HPC and I'm not sure what the errors are related to.
Do you have an idea? It seems really environment depended, but maybe you stumbled across something…
-
## Problem statement
We received an updated LIVD to the Reportstream inbox. The LIVD table needs to be uploaded into ReportStream.
## What you need to know
[LIVD-SARS-CoV-2-2024-07-11 PRIME.xlsx](h…
-
## Feature description
Add a box below "Wurden Sie getestet?": "Impfung" that includes a two buttons:
1. Register Vaccination
2. Register adverse side-effect
### 1. Button: Register Vaccinati…
-
From branch 12 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1502
KP.2 > C9286T,C14919T, S:S31del
Query:del21653, C9286T,C14919T
No. of seqs: 38 (Canada 4 Germany 2 USA 32 Chi…
-
Currently, the main page states this under Results for Genomics:
```
These lists are updated daily. There are 397 sites showing intra-host variation across 33 samples (with frequencies between 5% …
-
From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1538
KP.2+G28041T,G18025A (Orf1b:V1420M, Orf8:G50*)
GISAID query: G28041T,G18025A
No. of seqs: 42(USA 6(2 from Qatar, 2 from…
-
From branch 79 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1+C6968T+S:F456L
Query: C6968T, T22928C, C18894T
No. of seqs: 30 (Canada 1 China 3 France 1 Singapore 3 Sou…
-
:bug:
### :pencil: Describe the Issue
I had analyzed some RSV fastq files to generate consensus.fasta output (similar to SARS-CoV-2) using local resources and a roll-your-own pipeline of commands.…
-
**Description**
**Sub-lineage of:** KP.3
**Earliest sequence:** 2024-3-9, Tasmania — EPI_ISL_19140364
**Most recent sequence:** 2024-6-16, Canada, Alberta — EPI_ISL_19222338
**Continents circulati…
-
I've built a variation graph from a minia assembly of tiled, amplified, Illumina sequencing data of SARS-CoV-2. I wanted to call variants in the graph, so I aligned the reference sequence into it with…