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Now that we have a workaround for operating on datasets in `/home/data`, we don't actually need a lot of the extra work we originally had in `cis-bidsify`. We've already simplified the workflow, but t…
tsalo updated
4 years ago
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MrBayes container is missing `ssh` and/or `rsh`. Because of this, the MPI version of the program can not be launched:
```
$ singularity run https://depot.galaxyproject.org/singularity/mrbayes:3.2.7…
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@prudhomm commented on [Sat Mar 31 2018](https://github.com/feelpp/feelpp/issues/1136)
we need a script that hides all the gory docker/singularity details.
something like
```
feelppshell run -c [dock…
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Hello, thank you for providing these profiles, I have been using the slurm one for years and it has enabled all of our pipeline to run really well.
This past week I noticed an issue that I am unsur…
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Create the dockerfile and upload to docker hub/ singularity hub
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Hi,
Any idea why the packed environment file can't be found on the host?
Using `singularity build --remote ...` and I get:
```
INFO: Access Token Verified!
INFO: Token stored in /root…
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Currently the workflow for adding model (version)s to the eWaterCycle platform is (also see https://github.com/eWaterCycle/ewatercycle/issues/294)
1. make a dockerfile
2. build docker image
3. up…
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Good evening,
I need to run singularity, and I'd like to use the containerised version since easier to implement.
I can successfully pull the image with
```
singularity pull peregrine.sif docker:…
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I am attempting to run bwa-mem2 through a singularity container for human 35X whole genome sequence data set with following command. singularity exec /expanse/lustre/projects/scr104/mgujral/singular…
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Dear support team:
Is vafCorrect same as cgpvaf?
There are two approaches practical for us to install on our HPC cluster.
1. we have all the prerequisites already built on HPC cluster by mod…