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Dear all,
I would like to use preliminary reference SV calls from GIAB to benchmark some SV calling tools.
For _NA24385_ sample I am planning to use GIAB VCF file [ftp://ftp-trace.ncbi.nlm.nih.gov/g…
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Hi there,
My question is if I should perform VQSR after running GLNexus and what is the recommended tool for doing this from a GLNexus output. Should I run Sentieon or GATK4 VQSR?
Thank you!
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# Frame Analysis - Mortal Kombat 11
Alain Galván is an Engineer @ Marmoset.co, here's his personal portfolio focused on 🛆 Computer Graphics, 🎨 Art & 🎹🎸 Audio Design/Engineering.
[https://alain.xyz/]…
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Hello
I want to design a 3D scanning device that has an accuracy of 0.1 mm and a resolution of 0.2 mm. What camera, sensors and instructions do you recommend for this?
If you know any help in this f…
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Dear @PengyiZhang ,
Thanks for sharing the great work.
Are there any benchmarks for SSL? e.g., baseline and specific SSL dataset.
Moreover, how do you define the `small sample` in your title? i…
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## [Viral data.ipynb](https://github.com/maousi/HBV/blob/master/Viral%20data.ipynb)
You are looking at [NA values](http://localhost:8888/notebooks/Viral%20data.ipynb#NA-values). Plot 54 is great. I…
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Long TODO lists don't get done.
We are trying to keep an issue open if a real effort is happening to resolve it.
The below priority list gives a sense of where bcbio is heading in the next two rele…
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Hi there,
The [alvinfry-piscem paper](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881993/) understandably focuses on single cell sequencing performance, and finds comparable results between pisce…
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Directory structure is crazy. We need to agree on a structure and move things around.
```
find ~/ubuntu -type f -print0 | xargs -0 grep -l old_dir_name
```
Should give an idea of which files have d…
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**Is your feature request related to a problem? Please describe.**
This is an improvement to integrate PEDIA into VarFish.
PEDIA is an approach for prioritization of exome data by facial image a…