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[For a quick explanation of this issue, see the **_Results_** section at the bottom of this report. Similar issues: #506.]
**Category:** Model Definitions
**Test Name:** Disease Progression Defin…
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Current functionality does not support manipulating of parameters. E.g the SIR fit calculate the parameter `beta` and `gamma` by using `curvefit` and not by given values.
ckaus updated
8 years ago
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Feedback from Michelle
I noticed that in general, there is a lot less information that is immediately visible via graphics or summary data using ADSM versus NAADSM; I understand that much of this has…
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Current causation properties are all restricted to hold between materials and materials, materials and processes, or processes and processes. G2P association modeling requires causation between genot…
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HP:0003002 (Breast Carcinoma) is not currently associated with BRCA1 or BRCA2, the two genes associated with the majority of familial breast and ovarian cancer.
HP:0003002 (Breast Carcinoma) IS corre…
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As you know, we have been trying to [re-introduce](https://github.com/ga4gh/schemas/pull/432) the g2p schemas back into the mainline of the ga4gh schema repository.
A change in policy is before any sc…
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A topic that has come up in several task teams is the need to use inheritance concepts to model class hierarchies in our data models. This has come up specifically in the G2P and annotation task teams…
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Thanks for your ABSEIR package.
To run theSPatialSEIRModel, we firstly need set the DistanceModel object. Fox example, the distance was created by the followed codes:
DM1 = matrix(c(0,1,0,1,0,0,0,0…
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Create demo page with curator input forms using React components for form elements.
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We need the CTD gene-disease associations:
from http://ctdbase.org/downloads/CTD_genes_diseases.tsv.gz
these are relatively straightforward. we only want to pull the direct (not-inferred) associati…