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### 1. use decoupler
I think a few sections of the DE section could be cleaned up by using decoupler functions instead of custom ones:
* decoupler already has a function to compute pseudobulk: […
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`numpy.char.encode` and `numpy.char.decode` should effectively be inverses of each other if given the same encoding. However, I have found this not to be the case. It seems that truncating nulls (`'\x…
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Create a preprocessing pipeline for the Liver and Liver Tumor Segmentation dataset.
Refer to the previous repo for code: https://gitlab.com/umie/umie_dataset/-/blob/master/Test_dataset/CT/test_ct_liv…
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# Description de la DM
Le format du document n’est pas spécifié par la norme CDAr2, or ce format doit être précisé dans les métadonnées XDS lors de l’alimentation de l’entrepôt de documents (Volet Pa…
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Users should be able to programmatically access the same data we surface in our tools, including:
- Cell type descriptions
- Canonical marker genes
- Computational marker genes
**User Quotes**…
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Ideally you should be able to link directly from one sibling record to another, without having to visit the parent.
Example 1: one cadaver, leads to several tissue samples e.g. liver, fat, kidney, …
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Hi!
I used the following command to run the VarGen pipeline but I am getting the following error:
```
> disease_variants disease_annotation
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## BUG DESCRIPTION
### Problem
Attempting to parse an `mzXML` file that has zero (`0`) scans results in a `MzxmlParseError: 'scan'` error. These files can probably be skipped atm, since they a…
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I found some issues with the Biomarker searches within the Protein advanced search.
1. Searching for Biomarker disease using the shown example “liver cancer” results in error “No results found”.
…
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Title: Hydroxychloroquine in patients with COVID-19: an open-label, randomized, controlled trial
## Please paste a link to the paper or a citation here:
Link: https://doi.org/10.1101/2020.04…